Research

Research Interests

I am a forest pathologist interested in studying tree fungal diseases, host-pathogen interactions and control of plant diseases. I have a keen interest in invasive pathogens and ways to obviate their impact. I have interest in fungal endophytes (i.e. fungi that live inside plants) and how they vary in different ecosystems, their relation to host physiology and how they influence plant disease. 

TwitterResearchGate, ORCID

Current projects

Microbiome and their role in tree health. Funded by the Royal Swedish Academy of Agriculture and Forestry (KSLA) (PI). The microbiome of a plant influence ecologically important characteristics of the host, such as stress, disease tolerance. The goal of the project is to gain new information about the role of microbiome in early stages of Phytophthora infection at different time points of infection using microbiome study. The hypothesis is that the microbiome community differ in healthy vs. diseased plants, and that certain groups of microbes can act as barrier for the colonization of the pathogen.


Who lives inside? How fungal endophytes can protect ash from diebackFunded by The Royal Swedish Academy of Agriculture and Forestry (KSLA) (PI). The project aims to find out whether resistant and susceptible ash genotypes harbour different communities of fungal endophytes when exposed to a natural inoculum of Hymenoscyphus fraxineus and whether these assemblages are dynamic and have a relationship with the "ash dieback disease". Finally, we aim to investigate if certain endophytic fungi (individual species or groups) limit the in vitro growth of H. fraxineus through different mechanisms (e.g., chemical antagonism).


"The Good Soil" - can native soil microbiome suppress invasive soil-borne forest pathogens?. Funded by Fields forever Initiative (EU funded). Suppressive effects of soils and composts are positively correlated with factors like microbial activity and composition. We will explore the microbial community of different soils with differential expression of Phytophthora -disease symptoms. We will compare samples where Phytophthora infestation has been confirmed in earlier studies with samples where has not been detected. To validate the results, soil samplings will also be performed in several forests with similar features from the Czech Republic and Spain.


RESISTREE. Identification of Phytophthora resistant beech trees by the composition of endophyte communities, lesion formation and phenomics approaches. Funded by the EU's 2020 programme under the MSCA grant agreement No 845419. RESISTREE will deliver in-depth information about the host phenotypic traits and associated mycobiome that can suppress the establishment of the invasive Phytophthora-species (Oomycetes) on one of the keystone species of European forests, the European beech (Fagus sylvatica L.).


Natural regeneration of beech on Phytophthora-infested soilsFunded by The Royal Swedish Academy of Agriculture and Forestry. (PI) The aim of the project is to develop a basis for the regeneration of beech on woodlands which is affected by introduced fungal-like, oomycetes of the genus Phytophthora. The project seeks to systematically study whether natural regeneration or seed traits (germination/growth) influence early development and survival of beech in Phytophthora-infested soils. 


Consequences of tree decline for seedling performance via maternal effects. Funded by Carl Tryggers Foundation (PI: Johanna Witzell). The goal of the project is to test whether the offspring of declining trees deviates from the offspring of vital trees in terms of growth, chemical traits (defensive and stress chemistry), resistance to pathogen infections and biodiversity of potentially mutualistic endophytic fungi. The project will deliver new scientific information about the maternal effects in tree populations and practically relevant information about the quality of seed crops and seedling performance. 


Preventing the spread of new pathogens in Nordic forests to secure sustainable forestry in growing bioeconomy. Funded by the Nordic Forest Research (SNS).  PI: Johanna Witzell. The aims of the proposed project are to support development of early detection solutions to stop introduction of pathogens, to improve science-based knowledge about the mechanisms of forest pathogen invasions, to contribute to formation of guidelines for sustainable forest management strategies, to mitigate the effects of introduced pathogens and to improve the awareness of different actors in society about the risks of pathogen invasions, and strength the science-society interaction in questions related to forest health.


Previous projects

  • Mycoviruses as biological controllers of pine pitch canker (AGL2012-39912). 
  • Biological Control of Gremmeniella abietina in Spain (AGL2008-03622).
  • PLURIFOR: Transnational plans for the management of forests risks (Interreg Sudoe). 
  • REINFFORCE: REsource INFrastructure for monitoring and adapting European Atlantic FORests under Changing climate. 
  • COST ACTION FP1406 - Pine pitch canker - strategies for management of Gibberella circinata in greenhouses and forests (PINESTRENGTH).

Other projects

  • ICP-Forest Monitoring Network Level II in Spain (2005, 2006, 2007, 2008).
  • Characterization and location of Quercus sp. with symptoms of Oak Decline (2006, 2007).
  • Measurements of eradication and control of Fusarium circinatum in pine stands (2006, 2007).
  • Field sampling to determine the presence of Phytophthora spp. in alder stands (2006, 2007).
  • Regional Forest Health Monitoring Network (2005, 2006, 2007, 2008).
  • Phytosanitary evaluation of unique Elms and Chestnuts (2006, 2007).
  • Collaborations

  • Vanesa Paredes- Unidad de Información Geográfica e Innovación. Instituto Tecnológico Agrario. Junta de Castilla y León Consejería de Agricultura y Ganadería
  • Leticia Botella- Department of Forest Protection and Wildlife Management, Faculty of Forestry and Wood Technology, Mendel University, Brno, Czech Republic.
  • Oscar Santamaría- Department of Engineering of Agronomic and Forest Environment, School of Agrarian Engineering, University of Extremadura, Badajoz, Spain.
  • Rosa Romeralo-Tapia- BIOFORGE, University of Valladolid, Valladolid, Spain.
  • Valentín Pando- Department of Statistics and Operative Research, Higher Technical School of Agrarian Engineering, University of Valladolid, Palencia, Spain.
  • Gaston Laflamme and Chantal Cote- Laurentian Forestry Centre, Natural Ressources, Quebec, Canada.
  • Johanna Witzell- Department of Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences, Alnarp, Sweden.
  • Jonás Oliva and Jan Stenlid- Department of Forest Mycology and Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden.
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